BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D11LP1|AL428904
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1764 1717 0.0
>3x_Contig1764
Length = 22510
Score = 1717 bits (865), Expect = 0.0
Identities = 877/881 (99%), Gaps = 1/881 (0%)
Strand = Plus / Plus
Query: 1 gatccttcttcacaatctaattaaaaatacgttaacctggaataacctgcaatgtaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12994 gatccttcttcacaatctaattaaaaatacgttaacctggaataacctgcaatgtaagcc 13053
Query: 61 gatcttctaatcgttaaacatgactaactcccaggcacgttacatacagagaactaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13054 gatcttctaatcgttaaacatgactaactcccaggcacgttacatacagagaactaaaca 13113
Query: 121 aaaatgcatctagaataatgagggaaaggaaaaatttttcgcacattaaaacgcagagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13114 aaaatgcatctagaataatgagggaaaggaaaaatttttcgcacattaaaacgcagagcc 13173
Query: 181 caaaaagcgtgaaaatttgtgaaaaagaaatgagttttttaactgggaaagaaaagaagg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13174 caaaaagcgtgaaaatttgtgaaaaagaaatgagtattttaactgggaaagaaaagaagg 13233
Query: 241 aatataatacagaaaaaaaaattgaattgaaggaagagatacgttttagtagttactttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13234 aatataatacagaaaaaaaaattgaattgaaggaagagatacgttttagtagttactttt 13293
Query: 301 gttcagttccatcctttgtactgtttacagacaggttaaattattttgtattctatatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13294 gttcagttccatcctttgtactgtttacagacaggttaaattattttgtattctatatat 13353
Query: 361 aaaagttttcatatactttcagttcttacttacagttctccagacttacttctcattaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13354 aaaagttttcatatactttcagttcttacttacagttctccagacttacttctcattaaa 13413
Query: 421 gatatacatcttaagaaatactttcaatcttattagaagatagatagacggagaatacga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13414 gatatacatcttaagaaatactttcaatcttattagaagatagatagacggagaatacga 13473
Query: 481 atcaagaagaagataaaagtaaagagacaataaatttattaatcatgtctgatattgcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13474 atcaagaagaagataaaagtaaagagacaataaatttattaatcatgtctgatattgcgg 13533
Query: 541 aaaacatgtctaatttgtctgttcaggacaatgattctggtgcmacttcaggtgacagca 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13534 aaaacatgtctaatttgtctgttcaggacaatgattctggtgcaacttcaggtgacagca 13593
Query: 601 gacgttcttatgttcctcctcatgtgagaggccaacaaagaagtggtagcggtaactatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13594 gacgttcttatgttcctcctcatgtgagaggccaacaaagaagtggtagcggtaactatc 13653
Query: 661 gtggtcgttctgataacttcggtggtaacgagagatccttctttggtaacgaaagaagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13654 gtggtcgttctgataacttcggtggtaacgagagatccttctttggtaacgaaagaagag 13713
Query: 721 gcggtggatacagcagaggcggtagaggttccgtcaactggggtggttcc-actggggtg 779
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 13714 gcggtggatacagcagaggcggtagaggttccgtcaactggggtggttccaactggggtg 13773
Query: 780 gcagaaacgacagtwgaggttctggcggttacggtggtggtaactcatctggtagatgga 839
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13774 gcagaaacgacagtagaggttctggcggttacggtggtggtaactcatctggtagatgga 13833
Query: 840 tcgacggtaagcacgtcccagctgccaagaacgctaacttg 880
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 13834 tcgacggtaagcacgtcccagctgccaagaacgctaacttg 13874
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8523
Number of Sequences: 1807
Number of extensions: 8523
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)